2025-04-09-24_articles_updated

期刊: Computational biology and bioinformatics : nature.com subject feeds

标题: 生物医学机器学习中的基准危机

英文标题: A benchmarking crisis in biomedical machine learning

链接: https://www.nature.com/articles/s41591-025-03637-3

期刊: Computational biology and bioinformatics : nature.com subject feeds

标题: 机器学习辅助的无细胞DNA筛查预测先兆子痫风险

英文标题: Machine learning-assisted cell-free DNA screening predicts pre-eclampsia risk

链接: https://www.nature.com/articles/s44161-025-00647-9

期刊: Nature Medicine

标题: 生物医学机器学习中的基准危机

英文标题: A benchmarking crisis in biomedical machine learning

链接: https://www.nature.com/articles/s41591-025-03637-3

期刊: Nature Medicine

标题: 与葡萄糖控制受损和生活习惯改变相关的微生物组-代谢组动态

英文标题: Microbiome–metabolome dynamics associated with impaired glucose control and responses to lifestyle changes

链接: https://www.nature.com/articles/s41591-025-03642-6

期刊: Nature Genetics

标题: 使用基因组印度项目映射遗传多样性

英文标题: Mapping genetic diversity with the GenomeIndia project

链接: https://www.nature.com/articles/s41588-025-02153-x

期刊: Latest headlines from BMJ

标题: 逐步降低药物涂层球囊成形术后患者的双重抗血小板治疗（REC-CAGEFREE II）：多中心、随机、开放标签、评估者盲法、非劣效性试验

英文标题: Stepwise dual antiplatelet therapy de-escalation in patients after drug coated balloon angioplasty (REC-CAGEFREE II): multicentre, randomised, open label, assessor blind, non-inferiority trial

链接: http://www.bmj.com/content/389/bmj.r694.short?rss=1

期刊: medrxiv Subject Collection: Health Informatics

标题: 基于机器学习的患有高血压的重症患者死亡率预测：比较分析、公平性和可解释性

英文标题: Machine Learning-Based Mortality Prediction in Critically Ill Patients with Hypertension: Comparative Analysis, Fairness, and Interpretability

链接: http://medrxiv.org/cgi/content/short/2025.04.05.25325307v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: 条件深度学习模型揭示氨基酸剥夺期间的翻译延长决定因素

英文标题: Conditional Deep Learning Model Reveals Translation Elongation Determinants during Amino Acid Deprivation

链接: https://www.biorxiv.org/content/10.1101/2025.04.03.646988v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: PG-SCUnK：使用单拷贝和通用K-mer测量全基因组图的代表性

英文标题: PG-SCUnK: measuring pangenome graph representativeness using Single-Copy and Universal K-mers

链接: https://www.biorxiv.org/content/10.1101/2025.04.03.646777v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: 使用单群在预测调控级联中表型的基因组学和代谢参数整合中

英文标题: Using Monoids for the Integration of Genomic and Metabolic Parameters in the Prediction of Phenotypes in Regulatory Cascades.

链接: https://www.biorxiv.org/content/10.1101/2025.04.03.646970v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: 单细胞多组学分析小鼠肝脏的昼夜节律性

英文标题: Single-Cell Multiomic Analysis of Circadian Rhythmicity in Mouse Liver

链接: https://www.biorxiv.org/content/10.1101/2025.04.03.647044v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: 《奇瓦帕斯芝士克雷玛在成熟过程中的物理化学和微生物组变化》

英文标题: Physicochemical and microbiome changes in queso crema de Chiapas during ripening

链接: https://www.biorxiv.org/content/10.1101/2025.04.02.646936v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: ATOMICA：学习分子间相互作用的通用表示

英文标题: ATOMICA: Learning Universal Representations of Intermolecular Interactions

链接: https://www.biorxiv.org/content/10.1101/2025.04.02.646906v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: 重建和利用针对人类病原体C. neoformans的专用基因组规模代谢模型

英文标题: Reconstruction and exploitation of a dedicated Genome-Scale Metabolic Model of the human pathogen C. neoformans

链接: https://www.biorxiv.org/content/10.1101/2025.04.02.646762v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: Quartformer：一种用于系统发育树构建的准确深度学习框架

英文标题: Quartformer: An Accurate Deep LearningFramework for Phylogenetic TreeConstruction

链接: https://www.biorxiv.org/content/10.1101/2025.04.05.646867v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: 一个基于Galaxy的模块化免疫肽基因组（iPepGen）分析流程，用于发现、验证和优先排序候选癌症新抗原肽

英文标题: A modular, Galaxy-based immunopeptidogenomic (iPepGen) analysis pipeline for discovery, verification, and prioritization of candidate cancer neoantigen peptides

链接: https://www.biorxiv.org/content/10.1101/2025.04.07.647596v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: SPAC：一个可扩展的集成企业平台，用于多路复用组织成像的单细胞空间分析全流程

英文标题: SPAC: a scalable, integrated enterprise platform for end-to-end single cell spatial analysis of multiplexed tissue imaging

链接: https://www.biorxiv.org/content/10.1101/2025.04.02.646782v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: RNAcompare：整合机器学习算法，基于临床和多组学数据揭示表型的相似性——类风湿性关节炎和心力衰竭作为案例研究

英文标题: RNAcompare: Integrating machine learning algorithms to unveil the similarities of phenotypes based on clinical, multi-omics using Rheumatoid Arthritis and Heart Failure as Case Studies

链接: https://www.biorxiv.org/content/10.1101/2025.04.02.646760v1?rss=1

期刊: bioRxiv Subject Collection: Bioinformatics

标题: CanASM：一个用于癌症中基因组范围等位基因特异性DNA甲基化识别和注释的综合数据库

英文标题: CanASM: A comprehensive database for genome-wide allele-specific DNA methylation identification and annotation in cancer

链接: https://www.biorxiv.org/content/10.1101/2025.04.03.646980v1?rss=1

期刊: JAMA Network Open New Online

标题: 在等待测试结果期间重复访问患者门户网站及患者信息发送

英文标题: Repeated Access to Patient Portal While Awaiting Test Results and Patient Messaging

链接: https://jamanetwork.com/journals/jamanetworkopen/fullarticle/2832287

期刊: JAMA Current Issue

标题: 让药剂师参与制定应对处方药成本的策略

英文标题: Engaging Pharmacists in Strategies for Navigating Prescription Drug Costs

链接: https://jamanetwork.com/journals/jama/fullarticle/2831272

期刊: JAMA Current Issue

标题: 参与制定策略以应对处方药费用——回复

英文标题: Engaging Pharmacists in Strategies for Navigating Prescription Drug Costs—Reply

链接: https://jamanetwork.com/journals/jama/fullarticle/2831271

期刊: JAMA Current Issue

标题: 评估临床决策支持系统用于影像学申请的使用

英文标题: Evaluation of a Clinical Decision Support System for Imaging Requests

链接: https://jamanetwork.com/journals/jama/fullarticle/2830127

期刊: JAMA Current Issue

标题: 迈向美国生物医学研究的统一愿景

英文标题: Toward a Unified Vision for US Biomedical Research

链接: https://jamanetwork.com/journals/jama/fullarticle/2829855